TSASE
TSASE is used for saddle search. setup.py version string 1.0.
Versions
| Role | Ref | Commit | Source |
|---|---|---|---|
| saddle search | master | 98aac60b5d99 | https://github.com/henkelmangroup/tsase |
Version history
Best cost
Results
Ranked rows for this code, one version and one method on each row. PAR-2 counts a finished run as the calls it used and a failed run as twice the cap. An archived row shows the average it published, and its PAR-2 applies that rule to the failures the entry records. Scoring rules.
| Suite | Problem | Row | Family | Family rank | Unit | PAR-2 | Published | Median calls | Mean calls | Hessians | FD calls | Failures | Runs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Double-ended saddle search | LJ38 double-ended saddle | TSASE (1.0) · CI-NEB | Band / NEB | 15 | force calls | 3119.56 | 1833 | 1726.98 | 0 | 0 | crash 0, divergence 7, cap 17, wrong_stationary 0 | 50 | |
| Double-ended saddle search | LJ38 double-ended saddle | TSASE (1.0) · NEB | Band / NEB | 20 | force calls | 5000 | 1633 | 1652.86 | 0 | 0 | crash 0, divergence 36, cap 14, wrong_stationary 0 | 50 | |
| Double-ended saddle search | Lennard-Jones 38 transition-state separation | TSASE (1.0) · CI-NEB | Band / NEB | 19 | force calls | 451753 | 10000 | 9690.35 | 0 | 0 | crash 0, divergence 1, cap 43, wrong_stationary 2 | 51 | |
| Double-ended saddle search | Lennard-Jones 38 transition-state separation | TSASE (1.0) · NEB | Band / NEB | 22 | force calls | 500000 | 10000 | 9720.22 | 0 | 0 | crash 0, divergence 3, cap 44, wrong_stationary 4 | 51 | |
| Double-ended saddle search | Pt heptamer island | TSASE (1.0) · CI-NEB | Band / NEB | 17 | force calls | 2524.53 | 564 | 639.61 | 0 | 0 | crash 0, divergence 20, cap 1, wrong_stationary 0 | 59 | |
| Double-ended saddle search | Pt heptamer island | TSASE (1.0) · NEB | Band / NEB | 20 | force calls | 6000 | 543 | 788.746 | 0 | 0 | crash 0, divergence 56, cap 3, wrong_stationary 0 | 59 | |
| Harmonic transition state theory | Pt heptamer island | TSASE · quenchDimer+neb-QM | Band / NEB | 1 | force calls | 293200 | 293200 | 0 | 0 | not recorded | 10 | ||
| Harmonic transition state theory | Pt heptamer island | TSASE · Dimer-QM rotation: max=50, tol=5 | Minimum mode | 9 | force calls | 3.239e+06 | 3.239e+06 | 0 | 0 | not recorded | 4 | ||
| Harmonic transition state theory | Pt heptamer island | TSASE · alphaDimer-QM | Minimum mode | 10 | force calls | 1.908e+07 | 1.908e+07 | 0 | 0 | not recorded | 1 | ||
| Lowest eigenvector | Lennard-Jones 38 | TSASE (410) · tsase-lanczos | Minimum mode | 2 | force calls | 25 | 25 | 25 | 0 | 0 | 0 failed | 200 | |
| Lowest eigenvector | Lennard-Jones 38 | TSASE (408) · tsase-dimer-bfgs | Minimum mode | 8 | force calls | 27 | 27 | 27 | 0 | 0 | 0 failed | 200 | |
| Lowest eigenvector | Lennard-Jones 38 | TSASE (408) · tsase-dimer-cg | Minimum mode | 13 | force calls | 29 | 29 | 29 | 0 | 0 | 0 failed | 200 | |
| Lowest eigenvector | Lennard-Jones 38 | TSASE (1.0) · SSDimer | Minimum mode | 19 | force calls | 2420.61 | 233 | 267.945 | 0 | 0 | crash 0, divergence 22, cap 0, wrong_stationary 0 | 200 | |
| Minimization | Lennard-Jones 38 clusters | tsase-SDLBFGS maxstep=0.1 optimizer='maxatom' | Minimizers | 4 | force calls | 166 | 166 | 166 | 0 | 0 | 0 failed | 1000 | |
| Minimization | Lennard-Jones 38 clusters | TSASE (1.0) · SDLBFGS | Minimizers | 15 | force calls | 257.2 | 169 | 177.96 | 0 | 0 | crash 0, divergence 0, cap 0, wrong_stationary 4 | 1000 | |
| Minimization | Lennard-Jones 38 clusters | TSASE (1.0) · MDMin | Minimizers | 71 | force calls | 20000 | 10000 | 10000 | 0 | 0 | crash 0, divergence 0, cap 1000, wrong_stationary 0 | 1000 | |
| Minimization | Morse bulk | tsase-SDLBFGS maxstep=0.1 optimizer='maxatom' | Minimizers | 4 | force calls | 19 | 19 | 19 | 0 | 0 | 0 failed | 100 | |
| Minimization | Morse bulk | TSASE (1.0) · SDLBFGS | Minimizers | 61 | force calls | 17606.4 | 50 | 50.37 | 0 | 0 | crash 0, divergence 0, cap 0, wrong_stationary 88 | 100 | |
| Nudged elastic band | Pt heptamer island | TSASE (1.0) · CI-NEB | Band / NEB | 11 | force calls per band | 1521.15 | 1427 | 1521.15 | 0 | 0 | crash 0, divergence 0, cap 0, wrong_stationary 0 | 13 | |
| Nudged elastic band | Pt heptamer island | TSASE (1.0) · NEB | Band / NEB | 13 | force calls per band | 20000 | 1459 | 1521.77 | 0 | 0 | crash 0, divergence 13, cap 0, wrong_stationary 0 | 13 | |
| Transition state optimization | Lennard-Jones 38 | TSASE (1.0) · SSDimer | Minimum mode | 14 | force calls | 20000 | 10000 | 10000 | 0 | 0 | crash 0, divergence 0, cap 200, wrong_stationary 0 | 200 | |
| Transition state optimization | Pt heptamer island | TSASE (1.0) · SSDimer | Minimum mode | 12 | force calls | 1144.31 | 892 | 1144.31 | 0 | 0 | crash 0, divergence 0, cap 0, wrong_stationary 0 | 49 |